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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41528140_41528941_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41528140 - 41528941

Intron Length:

802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

ATGCCATGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTCAT

U12 Branch Point Sequence:

CAAGGTTCATTC

Flanking Amino Acid:

NWIFKEKYNYDYEDEEEWSP

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

73.2

37.4

Major BPS

0.42

1.4

71.4

45.1

Major PPT

65.4

0.35

1.1

58.7

41.5

Minor 5ss

31.6

-2.1

2.9

39.6

39.8

Minor BPS

35.7

-1.1

1.9

35.62

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045091

41525098 - 41545224

20127

ENSAPLT00000024291

41525739 - 41530198

4460