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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41529327_41529630_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41529327 - 41529630

Intron Length:

304

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGAGC

5'SS Class:

major

3'SS Sequence:

GTCTGTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

GTTGTCTCACCG

Flanking Amino Acid:

DLSAQNPNIQVTIEVVDDPQ

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

63.9

42.4

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

78.6

0.64

0.9

69.2

41.8

Minor 5ss

25.8

-2.8

3.2

33.4

42.1

Minor BPS

46.9

-0.3

55.64

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045091

41525098 - 41545224

20127

ENSAPLT00000024291

41525739 - 41530198

4460