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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41555863_41557782_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41555863 - 41557782

Intron Length:

1920

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTTTA

5'SS Class:

major

3'SS Sequence:

TTCTTTCTGGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TCATTCTGACAA

Flanking Amino Acid:

PLMLYMPAKIGAFGREMLKR

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

38.1

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

78.3

0.64

0.9

77.2

31.6

Minor 5ss

41.9

-0.9

3.1

48.8

47.3

Minor BPS

47.3

-0.2

1.8

57.84

41.4

Associated Gene:

Gene:

SPTLC2

Ensembl Gene ID:

ENSAPLG00000015435

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016127

41550930 - 41609442

58513