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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41594408_41598741_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41594408 - 41598741

Intron Length:

4334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTTCTTCTAATT

Flanking Amino Acid:

SMNIPALVGKGCLILSDELN

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.5

41.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

75.9

0.58

0.9

33.6

Minor 5ss

41.4

-1

3.3

58.6

46.2

Minor BPS

54.7

0.23

1.7

73.15

38.4

Associated Gene:

Gene:

SPTLC2

Ensembl Gene ID:

ENSAPLG00000015435

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016127

41550930 - 41609442

58513