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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41600586_41609205_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41600586 - 41609205

Intron Length:

8620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCACC

5'SS Class:

major

3'SS Sequence:

TGATGTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTCCTTTTACT

Flanking Amino Acid:

QNAIEREEQKDFVPLYQDFE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.2

69.7

41.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

73.3

0.53

69.4

45.8

Minor 5ss

46.2

-0.4

2.6

61.9

42.5

Minor BPS

72.7

0.8

1.6

89.79

Associated Gene:

Gene:

SPTLC2

Ensembl Gene ID:

ENSAPLG00000015435

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016127

41550930 - 41609442

58513