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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41628109_41630216_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41628109 - 41630216

Intron Length:

2108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

GCACTTTGAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

GCACTTTGAAAA

Flanking Amino Acid:

DLWGQSKEQLRQVLKTFHYE

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

76.7

33.9

Major BPS

64.5

0.36

65.2

28.2

Major PPT

50.4

0.01

1.2

40.6

Minor 5ss

29.1

-2.4

2.7

33.3

41.7

Minor BPS

45.7

-0.3

1.4

48.31

35.1

Associated Gene:

Gene:

ALKBH1

Ensembl Gene ID:

ENSAPLG00000015685

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034694

41628045 - 41636907

8863