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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41630380_41633496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41630380 - 41633496

Intron Length:

3117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTACC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTATGGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTCTCCCTACCC

Flanking Amino Acid:

WKAYGLNGYPGFIFIRNPFL

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

78.8

35.5

Major BPS

83.9

0.84

73.9

41.3

Major PPT

72.6

0.51

1.1

73.4

Minor 5ss

35.6

-1.6

2.9

42.3

Minor BPS

59.6

0.28

75.15

41.6

Associated Gene:

Gene:

ALKBH1

Ensembl Gene ID:

ENSAPLG00000015685

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034694

41628045 - 41636907

8863

ENSAPLT00000016356

41623633 - 41636907

13275