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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41636827_41638452_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41636827 - 41638452

Intron Length:

1626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

AATTGGTGACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTCTCTTTAATT

Flanking Amino Acid:

GAVQRCQLPFDKDTGFHKRF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.3

64.9

41.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

52.7

0.06

1.1

44.7

45.9

Minor 5ss

32.2

-2

2.7

37.4

33.9

Minor BPS

83.8

1.14

91.31

32.6

Associated Gene:

Gene:

SLIRP

Ensembl Gene ID:

ENSAPLG00000000880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000856

41636559 - 41641851

5293