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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41638553_41641780_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

41638553 - 41641780

Intron Length:

3228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTCCAAGG

5'SS Class:

weak_major

3'SS Sequence:

GCTGCAACTTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

GTCGCTGCAACT

Flanking Amino Acid:

TLQKDSHILEGQKQPPHTLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.2

0.1

1.4

49.6

46.7

Major BPS

76.3

0.65

67.3

39.3

Major PPT

47.5

-0.1

1.7

52.1

41.8

Minor 5ss

33.7

-1.9

2.9

41.7

44.3

Minor BPS

45.1

-0.3

2.2

64.22

46.4

Associated Gene:

Gene:

SLIRP

Ensembl Gene ID:

ENSAPLG00000000880

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000856

41636559 - 41641851

5293