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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41640776_41640859_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41640776 - 41640859

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCGCCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATCAT

U12 Branch Point Sequence:

TTAAAAGCAACT

Flanking Amino Acid:

DDLEARIKTNRFVPDKEFSN

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

67.8

43.5

Major BPS

70.5

0.51

1.3

41.2

Major PPT

70.6

0.46

0.8

61.1

35.1

Minor 5ss

28.6

-2.5

3.5

37.8

47.1

Minor BPS

40.5

-0.6

2.4

64.74

44.6

Associated Gene:

Gene:

SNW1

Ensembl Gene ID:

ENSAPLG00000015739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016450

41640023 - 41656041

16019