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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41641024_41642052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41641024 - 41642052

Intron Length:

1029

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATTAT

U12 Branch Point Sequence:

TTCTTCTTCACA

Flanking Amino Acid:

YDQRLFNQTKGMDSGFAGGE

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

83.2

28.3

Major BPS

0.42

1.3

60.1

46.3

Major PPT

87.5

0.84

0.7

83.3

25.2

Minor 5ss

36.4

-1.5

3.1

48.8

46.9

Minor BPS

68.4

0.57

1.7

78.35

38.8

Associated Gene:

Gene:

SNW1

Ensembl Gene ID:

ENSAPLG00000015739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016450

41640023 - 41656041

16019