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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41642779_41644421_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41642779 - 41644421

Intron Length:

1643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TGCATTTGTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTGTGTATAATG

Flanking Amino Acid:

RAGIKTHVEKEDGEARERDE

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

Major BPS

0.62

1.4

85.7

34.9

Major PPT

74.7

0.56

72.6

42.2

Minor 5ss

53.1

0.1

2.3

69.7

41.2

Minor BPS

48.5

-0.2

2.1

59.53

43.1

Associated Gene:

Gene:

SNW1

Ensembl Gene ID:

ENSAPLG00000015739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016450

41640023 - 41656041

16019