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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41645034_41646311_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41645034 - 41646311

Intron Length:

1278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTAAG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCACTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAA

U12 Branch Point Sequence:

CTGTGATTAACT

Flanking Amino Acid:

PCISNWKNAKGYTIPLDKRL

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

79.8

35.1

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

74.7

0.56

0.8

71.7

34.1

Minor 5ss

35.1

-1.7

2.7

42.1

44.6

Minor BPS

57.1

0.3

2.1

76.77

45.6

Associated Gene:

Gene:

SNW1

Ensembl Gene ID:

ENSAPLG00000015739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016450

41640023 - 41656041

16019