Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_41715359_41719138_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41715359 - 41719138

Intron Length:

3780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGCTA

5'SS Class:

strong_major

3'SS Sequence:

TCATTGTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

GTCTGCTTCATT

Flanking Amino Acid:

QSSKDILLMEVLLLVVKQIF

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

39.3

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

78.5

0.64

0.9

76.4

37.4

Minor 5ss

33.7

-1.9

3.5

48.3

Minor BPS

50.5

0.1

2.2

71.98

45.4

Associated Gene:

Gene:

ADCK1

Ensembl Gene ID:

ENSAPLG00000016110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029233

41664617 - 41739533

74917

ENSAPLT00000016811

41664605 - 41739533

74929