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Intron Name: Anas_platyrhynchos_platyrhynchos_5_41719298_41722782_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

41719298 - 41722782

Intron Length:

3485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TGTTATTTAACC

Flanking Amino Acid:

HMLRNFDFLKVPRIYWELST

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.1

37.5

Major BPS

79.5

0.73

0.9

36.9

Major PPT

89.5

0.89

0.7

88.2

29.1

Minor 5ss

23.1

-3.1

3.2

27.7

44.2

Minor BPS

73.7

0.72

1.4

80.26

34.1

Associated Gene:

Gene:

ADCK1

Ensembl Gene ID:

ENSAPLG00000016110

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029233

41664617 - 41739533

74917

ENSAPLT00000016811

41664605 - 41739533

74929