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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4179767_4181013_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4179767 - 4181013

Intron Length:

1247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGTAAGT

5'SS Class:

major

3'SS Sequence:

TCTGAACTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

ATAATCTGAACT

Flanking Amino Acid:

RRHCGLGFSEFQEGEEEAAG

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

68.3

42.6

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

69.2

0.43

0.9

59.3

41.7

Minor 5ss

33.9

-1.8

3.3

49.5

46.3

Minor BPS

63.4

0.5

1.5

77.14

38.5

Associated Gene:

Gene:

C11orf58

Ensembl Gene ID:

ENSAPLG00000018784

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028246

4177658 - 4181220

3563