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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4196254_4197104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4196254 - 4197104

Intron Length:

851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

ACTTTCCTGCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTGTTTTGCACT

Flanking Amino Acid:

EKIKSILTKSSMHNLQPAIA

Intron Amino Acid Position:

1235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.2

30.2

Major BPS

84.4

0.85

34.5

Major PPT

68.9

0.43

62.8

39.1

Minor 5ss

37.3

-1.4

2.8

49.7

46.6

Minor BPS

52.3

0.15

1.9

75.75

41.5

Associated Gene:

Gene:

PLEKHA7

Ensembl Gene ID:

ENSAPLG00000008901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032075

4192752 - 4327076

134325

ENSAPLT00000044368

4192752 - 4299103

106352

ENSAPLT00000019707

4192752 - 4322660

129909

ENSAPLT00000042205

4192752 - 4322660

129909

ENSAPLT00000009300

4192752 - 4279793

87042

ENSAPLT00000036589

4190988 - 4322660

131673

ENSAPLT00000035209

4191041 - 4327076

136036

ENSAPLT00000048066

4192752 - 4322660

129909