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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4202923_4203315_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4202923 - 4203315

Intron Length:

393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTGCCTTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

ATTCCCACACAT

Flanking Amino Acid:

YATLRRDRSKERPKSALERL

Intron Amino Acid Position:

1071

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

76.7

0.6

0.9

73.4

37.1

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

-0.3

2.1

67.08

42.7

Associated Gene:

Gene:

PLEKHA7

Ensembl Gene ID:

ENSAPLG00000008901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032075

4192752 - 4327076

134325

ENSAPLT00000044368

4192752 - 4299103

106352

ENSAPLT00000019707

4192752 - 4322660

129909

ENSAPLT00000042205

4192752 - 4322660

129909

ENSAPLT00000009300

4192752 - 4279793

87042

ENSAPLT00000036589

4190988 - 4322660

131673

ENSAPLT00000035209

4191041 - 4327076

136036

ENSAPLT00000048066

4192752 - 4322660

129909