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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4204531_4204968_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4204531 - 4204968

Intron Length:

438

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TTCCCATTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TTTCCCATTACC

Flanking Amino Acid:

QSPVRLKPKVEDEAPPRPPL

Intron Amino Acid Position:

942

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

79.2

33.9

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

73.6

0.53

0.9

66.6

38.4

Minor 5ss

40.9

-1

2.8

58.9

39.3

Minor BPS

60.4

0.31

1.9

37.1

Associated Gene:

Gene:

PLEKHA7

Ensembl Gene ID:

ENSAPLG00000008901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009300

4192752 - 4279793

87042

ENSAPLT00000036589

4190988 - 4322660

131673

ENSAPLT00000048066

4192752 - 4322660

129909

ENSAPLT00000035209

4191041 - 4327076

136036

ENSAPLT00000032075

4192752 - 4327076

134325

ENSAPLT00000044368

4192752 - 4299103

106352

ENSAPLT00000019707

4192752 - 4322660

129909

ENSAPLT00000042205

4192752 - 4322660

129909