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Intron Name: Anas_platyrhynchos_platyrhynchos_5_42053046_42057815_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42053046 - 42057815

Intron Length:

4770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGTG

5'SS Class:

major

3'SS Sequence:

CTTTTCCGCAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GATTTTTTAATT

Flanking Amino Acid:

DVKVTRNLRQHSGIGHAMVN

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

69.7

40.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

65.6

0.35

1.1

33.2

Minor 5ss

32.9

-2

3.6

46.5

48.8

Minor BPS

73.9

0.83

1.1

81.24

34.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031595

42052743 - 42249458

196716