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Intron Name: Anas_platyrhynchos_platyrhynchos_5_42053046_42059598_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42053046 - 42059598

Intron Length:

6553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGTG

5'SS Class:

major

3'SS Sequence:

GTCCCTTGAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCCAT

U12 Branch Point Sequence:

TGTCCCTTGAAT

Flanking Amino Acid:

DVKVTRNLRQVTISVDGILT

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

69.7

40.9

Major BPS

62.1

0.3

1.4

72.5

43.5

Major PPT

61.2

0.25

57.6

37.4

Minor 5ss

32.9

-2

3.6

46.5

48.8

Minor BPS

70.3

0.72

1.4

83.31

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022669

42051237 - 42064334

13098

ENSAPLT00000016920

42049389 - 42249458

200070