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Intron Name: Anas_platyrhynchos_platyrhynchos_5_42057861_42059598_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42057861 - 42059598

Intron Length:

1738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGATATC

5'SS Class:

major

3'SS Sequence:

GTCCCTTGAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCCAT

U12 Branch Point Sequence:

TGTCCCTTGAAT

Flanking Amino Acid:

HAMVNKLHCLVTISVDGILT

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

71.3

38.8

Major BPS

62.1

0.3

1.4

72.5

43.5

Major PPT

61.2

0.25

57.6

37.4

Minor 5ss

38.4

-1.3

3.2

50.2

41.6

Minor BPS

70.3

0.72

1.4

83.31

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031595

42052743 - 42249458

196716