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Intron Name: Anas_platyrhynchos_platyrhynchos_5_42059761_42094702_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42059761 - 42094702

Intron Length:

34942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTGAT

U12 Branch Point Sequence:

TTGTGTCTGACA

Flanking Amino Acid:

SNNFMGCLKEVVYKNNDIRL

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

100

1.18

0.6

100

Major BPS

70.8

0.52

1.2

63.4

44.3

Major PPT

0.52

1.1

68.8

42.1

Minor 5ss

41.7

-0.9

2.9

59.7

44.8

Minor BPS

48.6

-0.1

2.1

66.57

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031595

42052743 - 42249458

196716

ENSAPLT00000016920

42049389 - 42249458

200070