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Intron Name: Anas_platyrhynchos_platyrhynchos_5_42095142_42100588_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42095142 - 42100588

Intron Length:

5447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGTGG

5'SS Class:

major

3'SS Sequence:

CCTCCTCCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

GTCTCCTTATCC

Flanking Amino Acid:

HVDIQRDGRSGTISVNSRRT

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

54.6

Major BPS

78.8

0.72

67.9

40.1

Major PPT

68.5

0.42

71.5

27.1

Minor 5ss

34.1

-1.8

3.6

46.4

Minor BPS

69.7

0.6

1.6

75.09

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031595

42052743 - 42249458

196716

ENSAPLT00000016920

42049389 - 42249458

200070