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Intron Name: Anas_platyrhynchos_platyrhynchos_5_42100973_42134773_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42100973 - 42134773

Intron Length:

33801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TGATTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTGAATT

Flanking Amino Acid:

TGYWGRTCEREASILSYDGS

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.5

1.07

0.7

84.1

30.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.1

0.68

0.9

73.9

36.5

Minor 5ss

39.6

-1.2

2.8

49.9

46.3

Minor BPS

68.6

0.66

1.3

82.56

32.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016920

42049389 - 42249458

200070

ENSAPLT00000031595

42052743 - 42249458

196716