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Intron Name: Anas_platyrhynchos_platyrhynchos_5_42134978_42142380_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

42134978 - 42142380

Intron Length:

7403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATCGTAT

5'SS Class:

weak_major

3'SS Sequence:

TTTCCCCATCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTCATTTATTT

Flanking Amino Acid:

GGRVKLMVNLDCIRINCNAS

Intron Amino Acid Position:

510

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.2

68.3

39.1

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

74.6

0.55

0.8

67.2

34.3

Minor 5ss

50.2

0.01

2.9

72.7

44.5

Minor BPS

56.8

0.29

1.7

78.23

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016920

42049389 - 42249458

200070

ENSAPLT00000031595

42052743 - 42249458

196716