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Intron Name: Anas_platyrhynchos_platyrhynchos_5_42142408_42222169_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42142408 - 42222169

Intron Length:

79762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TCGCCATCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

CTGACTTTAACT

Flanking Amino Acid:

LDCIRINCNASKGPETLYAG

Intron Amino Acid Position:

519

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

32.3

Major BPS

77.3

0.68

79.3

29.4

Major PPT

67.5

0.39

0.9

58.2

37.4

Minor 5ss

48.3

-0.1

2.8

72.9

37.4

Minor BPS

72.2

0.78

1.3

80.24

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031595

42052743 - 42249458

196716

ENSAPLT00000016920

42049389 - 42249458

200070