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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4214535_4217401_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4214535 - 4217401

Intron Length:

2867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTTGTTTGAAAC

Flanking Amino Acid:

KKDLEYLDLKIENNGPLINM

Intron Amino Acid Position:

665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.6

33.3

Major BPS

0.85

0.9

39.9

Major PPT

69.7

0.44

1.1

66.4

43.3

Minor 5ss

37.9

-1.4

3.3

56.5

47.6

Minor BPS

0.11

1.6

67.73

37.9

Associated Gene:

Gene:

PLEKHA7

Ensembl Gene ID:

ENSAPLG00000008901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042205

4192752 - 4322660

129909

ENSAPLT00000019707

4192752 - 4322660

129909

ENSAPLT00000009300

4192752 - 4279793

87042