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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4222050_4222136_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4222050 - 4222136

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

GGGCCACCGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TATTCCTCCACC

Flanking Amino Acid:

YVGSSDFMDRGFPPRRPHTP

Intron Amino Acid Position:

770

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

74.1

38.3

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

45.9

-0.2

1.1

37.8

34.1

Minor 5ss

33.1

-1.9

2.8

32.9

41.9

Minor BPS

0.36

76.14

39.9

Associated Gene:

Gene:

PLEKHA7

Ensembl Gene ID:

ENSAPLG00000008901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048066

4192752 - 4322660

129909