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Intron Name: Anas_platyrhynchos_platyrhynchos_5_42222290_42230984_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42222290 - 42230984

Intron Length:

8695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTCGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTGT

U12 Branch Point Sequence:

TGTTTCTTGTTT

Flanking Amino Acid:

KLMVDDDVAEGTMVGDHTRL

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

40.2

Major BPS

36.2

-0.8

4.3

65.7

43.2

Major PPT

76.7

0.6

76.9

37.3

Minor 5ss

27.1

-2.6

2.9

24.3

36.8

Minor BPS

46.8

-0.1

3.4

78.89

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016920

42049389 - 42249458

200070

ENSAPLT00000031595

42052743 - 42249458

196716