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Intron Name: Anas_platyrhynchos_platyrhynchos_5_42231367_42232742_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42231367 - 42232742

Intron Length:

1376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

ACTATGCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

AGAATTTTAACT

Flanking Amino Acid:

NDFIAVELVKGYIHYVFDLG

Intron Amino Acid Position:

686

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

77.9

38.6

Major BPS

89.7

0.98

0.7

89.9

Major PPT

73.5

0.53

65.1

40.6

Minor 5ss

34.6

-1.7

2.7

34.2

41.4

Minor BPS

0.52

1.3

72.53

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031595

42052743 - 42249458

196716

ENSAPLT00000016920

42049389 - 42249458

200070