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Intron Name: Anas_platyrhynchos_platyrhynchos_5_42232934_42234026_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42232934 - 42234026

Intron Length:

1093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

TCTTCTTCCATG

Flanking Amino Acid:

INGAKNLDLKGDLYIAGLAQ

Intron Amino Acid Position:

750

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

83.8

Major BPS

71.4

0.53

1.1

63.4

Major PPT

89.3

0.88

0.6

81.8

30.2

Minor 5ss

42.2

-0.9

2.9

59.5

Minor BPS

48.5

-0.2

58.73

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031595

42052743 - 42249458

196716

ENSAPLT00000016920

42049389 - 42249458

200070