Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_4228559_4235265_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4228559 - 4235265

Intron Length:

6707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTTA

5'SS Class:

major

3'SS Sequence:

TATTGGCTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

ATATTTATAATA

Flanking Amino Acid:

DRINRKFSFKAEHSGMRTYY

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

69.2

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

73.8

0.53

69.7

41.2

Minor 5ss

38.6

-1.3

3.6

55.4

48.8

Minor BPS

57.2

0.22

1.5

66.94

33.1

Associated Gene:

Gene:

PLEKHA7

Ensembl Gene ID:

ENSAPLG00000008901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044368

4192752 - 4299103

106352