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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4236624_4238390_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4236624 - 4238390

Intron Length:

1767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGCAT

U12 Branch Point Sequence:

CTTTCTTGCATT

Flanking Amino Acid:

VIVRGWLHKQDSSGMRLWKR

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.5

1.12

0.7

90.9

28.7

Major BPS

62.7

0.32

1.4

39.9

Major PPT

81.3

0.7

0.9

77.9

35.2

Minor 5ss

39.3

-1.2

2.8

50.6

45.9

Minor BPS

54.1

0.21

1.9

76.06

41.4

Associated Gene:

Gene:

PLEKHA7

Ensembl Gene ID:

ENSAPLG00000008901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035209

4191041 - 4327076

136036

ENSAPLT00000048066

4192752 - 4322660

129909

ENSAPLT00000032075

4192752 - 4327076

134325

ENSAPLT00000044368

4192752 - 4299103

106352

ENSAPLT00000019707

4192752 - 4322660

129909

ENSAPLT00000042205

4192752 - 4322660

129909

ENSAPLT00000009300

4192752 - 4279793

87042

ENSAPLT00000036589

4190988 - 4322660

131673