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Intron Name: Anas_platyrhynchos_platyrhynchos_5_42415396_42525461_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42415396 - 42525461

Intron Length:

110066

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGGGTGCC

5'SS Class:

major

3'SS Sequence:

TTCTGTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

GAATAATTAATG

Flanking Amino Acid:

RSPVSLRGGHAGATYIFGKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

62.1

38.4

Major BPS

0.82

0.8

24.9

Major PPT

84.4

0.77

0.7

80.5

31.5

Minor 5ss

27.6

-2.6

3.3

35.7

41.2

Minor BPS

48.8

-0.2

1.8

53.11

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036591

42415152 - 42774834

359683

ENSAPLT00000000655

42415152 - 42774834

359683

ENSAPLT00000043420

42415152 - 42774834

359683