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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4241659_4321680_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4241659 - 4321680

Intron Length:

80022

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAG

U12 Branch Point Sequence:

TGTGCTTTAGAG

Flanking Amino Acid:

FSEEGASYFIELNSPMSKQQ

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

62.1

38.7

Major BPS

55.2

0.13

1.6

60.7

45.9

Major PPT

87.7

0.85

0.7

81.2

36.5

Minor 5ss

27.9

-2.5

27.6

37.5

Minor BPS

49.1

-0.2

1.8

57.2

44.3

Associated Gene:

Gene:

PLEKHA7

Ensembl Gene ID:

ENSAPLG00000008901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019707

4192752 - 4322660

129909