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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4248477_4279722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4248477 - 4279722

Intron Length:

31246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTTTTCTTATTT

Flanking Amino Acid:

PGYPFYQVSCSHNQQTTSFR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

74.4

41.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

88.1

0.86

0.7

85.4

29.3

Minor 5ss

-0.9

2.9

59.1

45.4

Minor BPS

75.8

0.89

1.5

91.23

32.5

Associated Gene:

Gene:

PLEKHA7

Ensembl Gene ID:

ENSAPLG00000008901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009300

4192752 - 4279793

87042