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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4248477_4321858_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4248477 - 4321858

Intron Length:

73382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTTTTCTTATTT

Flanking Amino Acid:

ARQLRPHDPLSHNQQTTSFR

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

71.4

40.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

88.1

0.86

0.7

85.4

29.3

Minor 5ss

-2.3

3.1

41.6

Minor BPS

75.8

0.89

1.5

91.23

32.5

Associated Gene:

Gene:

PLEKHA7

Ensembl Gene ID:

ENSAPLG00000008901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035209

4191041 - 4327076

136036

ENSAPLT00000032075

4192752 - 4327076

134325