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Intron Name: Anas_platyrhynchos_platyrhynchos_5_42661682_42666555_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

42661682 - 42666555

Intron Length:

4874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAGTC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCACCATAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

CATCCTGTCACC

Flanking Amino Acid:

RPVEEWLQEKDDATPHHHLT

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

75.2

32.9

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

55.1

0.12

1.1

58.8

36.4

Minor 5ss

35.1

-1.7

3.5

50.5

46.1

Minor BPS

44.1

-0.4

2.3

56.29

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000000603

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043420

42415152 - 42774834

359683