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Intron Name: Anas_platyrhynchos_platyrhynchos_5_42801120_42816276_R

Intron Information:

Intron Rank:

151092

Intron Class:

major

Intron Phase:

Intron Coordinates:

42801120 - 42816276

Intron Length:

15157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGATGTT

5'SS Class:

major

3'SS Sequence:

TTTTATTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTCCTTGCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

74.6

35.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.9

0.9

0.7

85.2

29.1

Minor 5ss

31.1

-2.2

3.7

48.2

47.9

Minor BPS

55.2

0.16

1.9

73.68

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028808

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042783

42801069 - 42837704

36636