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Intron Name: Anas_platyrhynchos_platyrhynchos_5_42816440_42834211_R

Intron Information:

Intron Rank:

151093

Intron Class:

minor

Intron Phase:

Intron Coordinates:

42816440 - 42834211

Intron Length:

17772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

CAAAGTTTTCTAG|G

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TTTTCCTCAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.9

0.02

1.2

57.1

42.4

Major BPS

77.8

0.69

78.2

31.8

Major PPT

64.3

0.32

54.4

45.2

Minor 5ss

98.8

1.64

0.5

12.5

Minor BPS

83.9

1.06

1.3

92.11

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028808

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042783

42801069 - 42837704

36636