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Intron Name: Anas_platyrhynchos_platyrhynchos_5_42834339_42835254_R

Intron Information:

Intron Rank:

151094

Intron Class:

major

Intron Phase:

Intron Coordinates:

42834339 - 42835254

Intron Length:

916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGGGTATC

5'SS Class:

major

3'SS Sequence:

TTTTCTTTGTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTGCTGCTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

36.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.83

0.8

88.4

28.7

Minor 5ss

33.6

-1.9

3.1

41.6

39.5

Minor BPS

43.4

-0.6

2.3

52.7

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028808

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042783

42801069 - 42837704

36636