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Intron Name: Anas_platyrhynchos_platyrhynchos_5_42864180_42864479_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

42864180 - 42864479

Intron Length:

300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTATT

5'SS Class:

strong_major

3'SS Sequence:

GGCCTTCAGCAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCACAA

U12 Branch Point Sequence:

TCGGCCTTCAGC

Flanking Amino Acid:

QFVFEQLVEEFSGVAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

90.9

28.7

Major BPS

68.5

0.46

75.3

29.8

Major PPT

48.5

-0

1.2

45.1

40.9

Minor 5ss

47.2

-0.3

2.7

68.8

41.8

Minor BPS

47.4

-0.2

2.2

57.14

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047588

42863132 - 42864497

1366