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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43069120_43070780_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
43069120 - 43070780

Intron Length:
1661

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACAGCTC

5'SS Class:
major

3'SS Sequence:
TACTGTTTTATAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCCTAC

U12 Branch Point Sequence:
TACTGTTTTATA

Flanking Amino Acid:
VQEDERRIRTVAERYEKEKQ

Intron Amino Acid Position:
354

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.3
0.48
1.1
61.3
43.5

Major BPS
58.9
0.22
1.3
58.4
40

Major PPT
77.9
0.63
0.9
72.4
37.5

Minor 5ss
33.6
-1.9
3.7
50.1
46.4

Minor BPS
47.6
-0.1
2
59.37
41.5

Associated Gene:

Gene:
CEP128

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

42987708 - 43095799
108092

42993262 - 43095799
102538

42987610 - 43095799
108190

42987610 - 43095799
108190