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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43089167_43089864_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
43089167 - 43089864

Intron Length:
698

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTATAAACA

5'SS Class:
major

3'SS Sequence:
TTTTTCTGTGAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATAAAT

U12 Branch Point Sequence:
TAAATCTTACCT

Flanking Amino Acid:
DISRELSRRNRTDAEMRKTL

Intron Amino Acid Position:
192

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.4
0.36
1.1
60.7
37.8

Major BPS
74.5
0.61
1
79.6
29.1

Major PPT
76.6
0.6
1.1
79.4
32.9

Minor 5ss
39.7
-1.2
2.9
50.3
45.9

Minor BPS
59.8
0.39
1.7
74.59
41.8

Associated Gene:

Gene:
CEP128

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

42987708 - 43095799
108092

42993262 - 43095799
102538

42987610 - 43095799
108190

42987610 - 43095799
108190