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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43109467_43129555_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43109467 - 43129555

Intron Length:

20089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTTCA

5'SS Class:

major

3'SS Sequence:

TTTATTTCTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TTAACTCAAACT

Flanking Amino Acid:

IPSLPEHTQTLRFMETHLRT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

67.1

34.3

Major BPS

81.9

0.79

0.8

81.9

Major PPT

85.2

0.79

0.7

Minor 5ss

37.9

-1.4

2.9

51.5

44.9

Minor BPS

49.6

0.05

74.32

42.2

Associated Gene:

Gene:

TSHR

Ensembl Gene ID:

ENSAPLG00000001646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030677

43109291 - 43173082

63792

ENSAPLT00000002009

43109291 - 43173133

63843

ENSAPLT00000037186

43109291 - 43173082

63792

ENSAPLT00000036424

43109291 - 43173082

63792