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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43129628_43136003_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43129628 - 43136003

Intron Length:

6376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TGCTGGTGTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

GGTCGGTGACTT

Flanking Amino Acid:

AFSNLPNISRIYISIDETLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

83.5

28.7

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

64.3

0.32

61.4

44.6

Minor 5ss

45.3

-0.5

2.8

64.3

39.9

Minor BPS

35.5

-1

2.4

51.63

42.8

Associated Gene:

Gene:

TSHR

Ensembl Gene ID:

ENSAPLG00000001646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044190

43111500 - 43173082

61583

ENSAPLT00000002009

43109291 - 43173133

63843