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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43144166_43145394_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43144166 - 43145394

Intron Length:

1229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

CTCTCTGCTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

CTACATGTAATT

Flanking Amino Acid:

AFKNLPLLKYLGIFNTGLKV

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

73.2

0.52

0.8

65.4

36.2

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

45.3

-0.2

2.1

62.75

41.8

Associated Gene:

Gene:

TSHR

Ensembl Gene ID:

ENSAPLG00000001646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030677

43109291 - 43173082

63792

ENSAPLT00000002009

43109291 - 43173133

63843

ENSAPLT00000044190

43111500 - 43173082

61583

ENSAPLT00000037186

43109291 - 43173082

63792

ENSAPLT00000036424

43109291 - 43173082

63792