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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43145470_43152009_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43145470 - 43152009

Intron Length:

6540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

TTTTTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

AATACACTAATT

Flanking Amino Acid:

KIYSSDVNFLLKLYNNGFTS

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

78.6

35.6

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

93.6

0.98

0.6

89.1

19.8

Minor 5ss

43.2

-0.7

2.9

64.8

39.3

Minor BPS

49.5

0.04

1.9

71.02

39.2

Associated Gene:

Gene:

TSHR

Ensembl Gene ID:

ENSAPLG00000001646

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037186

43109291 - 43173082

63792