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Intron Name: Anas_platyrhynchos_platyrhynchos_5_43195020_43195893_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43195020 - 43195893

Intron Length:

874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

GGTATTTCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCAAT

U12 Branch Point Sequence:

TTACCAGTCACT

Flanking Amino Acid:

GGVQAPVIQQVLAPIPGGIS

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

61.8

0.29

1.4

70.7

42.6

Major PPT

69.3

0.44

67.1

43.6

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

44.6

-0.3

2.5

71.66

44.6

Associated Gene:

Gene:

GTF2A1

Ensembl Gene ID:

ENSAPLG00000002573

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002634

43186992 - 43210684

23693